use strict;
use warnings;
=head1 NAME
Algorithm::Evolutionary::Op::Breeder - Even more customizable single generation for an evolutionary algorithm.
=head1 SYNOPSIS
use Algorithm::Evolutionary qw( Individual::BitString
Op::Mutation Op::Crossover
Op::RouletteWheel
Op::Breeder);
use Algorithm::Evolutionary::Utils qw(average);
my @pop;
my $number_of_bits = 20;
my $population_size = 20;
my $replacement_rate = 0.5;
for ( 1..$population_size ) {
my $indi = new Algorithm::Evolutionary::Individual::BitString $number_of_bits ; #Creates random individual
$indi->evaluate( $onemax );
push( @pop, $indi );
}
my $m = new Algorithm::Evolutionary::Op::Mutation 0.5;
my $c = new Algorithm::Evolutionary::Op::Crossover; #Classical 2-point crossover
my $selector = new Algorithm::Evolutionary::Op::RouletteWheel $population_size; #One of the possible selectors
my $generation =
new Algorithm::Evolutionary::Op::Breeder( $selector, [$m, $c] );
my @sortPop = sort { $b->Fitness() <=> $a->Fitness() } @pop;
my $bestIndi = $sortPop[0];
my $previous_average = average( \@sortPop );
$generation->apply( \@sortPop );
=head1 Base Class
L<Algorithm::Evolutionary::Op::Base>
=head1 DESCRIPTION
Breeder part of the evolutionary algorithm; takes a population and returns another created from the first
=head1 METHODS
=cut
package Algorithm::Evolutionary::Op::Breeder;
use lib qw(../../..);
our $VERSION = '1.4';
use Carp;
use base 'Algorithm::Evolutionary::Op::Base';
use Algorithm::Evolutionary qw(Wheel
Op::Tournament_Selection);
# Class-wide constants
our $APPLIESTO = 'ARRAY';
our $ARITY = 1;
=head2 new( $ref_to_operator_array[, $selector = new Algorithm::Evolutionary::Op::Tournament_Selection 2 ] )
Creates a breeder, with a selector and array of operators
=cut
sub new {
my $class = shift;
my $self = {};
$self->{'_ops'} = shift || croak "No operators found";
$self->{'_selector'} = shift
|| new Algorithm::Evolutionary::Op::Tournament_Selection 2;
bless $self, $class;
return $self;
}
=head2 apply( $population[, $how_many || $population_size] )
Applies the algorithm to the population, which should have
been evaluated first; checks that it receives a
ref-to-array as input, croaks if it does not.
Returns a sorted, culled, evaluated population for next generation.
=cut
sub apply {
my $self = shift;
my $pop = shift || croak "No population here";
my $output_size = shift || @$pop; # Defaults to pop size
my @ops = @{$self->{'_ops'}};
#Select for breeding
my $selector = $self->{'_selector'};
my @genitors = $selector->apply( $pop );
#Reproduce
my $totRate = 0;
my @rates;
for ( @ops ) {
push( @rates, $_->{'rate'});
}
my $opWheel = new Algorithm::Evolutionary::Wheel @rates;
my @new_population;
for ( my $i = 0; $i < $output_size; $i++ ) {
my @offspring;
my $selectedOp = $ops[ $opWheel->spin()];
for ( my $j = 0; $j < $selectedOp->arity(); $j ++ ) {
my $chosen = $genitors[ rand( @genitors )];
# print "Elegido ", $chosen->asString(), "\n";
push( @offspring, $chosen->clone() );
}
my $mutante = $selectedOp->apply( @offspring );
push( @new_population, $mutante );
}
return \@new_population;
}
=head1 SEE ALSO
More or less in the same ballpark, alternatives to this one
=over 4
=item *
L<Algorithm::Evolutionary::Op::GeneralGeneration>
=item *
L<Algorithm::Evolutionary::Op::Breeder_Diverser>
=item *
L<Algorithm::Evolutionary::Op::Generation_Skeleton> does have a incompatible interface
=back
=head1 Copyright
This file is released under the GPL. See the LICENSE file included in this distribution,
or go to http://www.fsf.org/licenses/gpl.txt
=cut
"The truth is out there";