---
abstract: 'BioPerl-Run - wrapper toolkit'
author:
  - 'BioPerl Team <bioperl-l@bioperl.org>'
build_requires:
  Bio::Root::Test: '0'
  Bio::Root::Version: '1.007000'
configure_requires:
  Module::Build: '0.42'
dynamic_config: 1
generated_by: 'Module::Build version 0.4224, CPAN::Meta::Converter version 2.150005'
license: perl
meta-spec:
  url: http://module-build.sourceforge.net/META-spec-v1.4.html
  version: '1.4'
name: BioPerl-Run
provides:
  Bio::DB::ESoap:
    file: lib/Bio/DB/ESoap.pm
    version: '1.007003'
  Bio::DB::ESoap::WSDL:
    file: lib/Bio/DB/ESoap/WSDL.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities:
    file: lib/Bio/DB/SoapEUtilities.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::DocSumAdaptor:
    file: lib/Bio/DB/SoapEUtilities/DocSumAdaptor.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::DocSumAdaptor::docsum:
    file: lib/Bio/DB/SoapEUtilities/DocSumAdaptor.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::FetchAdaptor:
    file: lib/Bio/DB/SoapEUtilities/FetchAdaptor.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::FetchAdaptor::seq:
    file: lib/Bio/DB/SoapEUtilities/FetchAdaptor/seq.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::FetchAdaptor::species:
    file: lib/Bio/DB/SoapEUtilities/FetchAdaptor/species.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::GQueryAdaptor:
    file: lib/Bio/DB/SoapEUtilities/GQueryAdaptor.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::GQueryAdaptor::gquery:
    file: lib/Bio/DB/SoapEUtilities/GQueryAdaptor.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::LinkAdaptor:
    file: lib/Bio/DB/SoapEUtilities/LinkAdaptor.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::LinkAdaptor::linkset:
    file: lib/Bio/DB/SoapEUtilities/LinkAdaptor.pm
    version: '1.007003'
  Bio::DB::SoapEUtilities::Result:
    file: lib/Bio/DB/SoapEUtilities/Result.pm
    version: '1.007003'
  Bio::Factory::EMBOSS:
    file: lib/Bio/Factory/EMBOSS.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Amap:
    file: lib/Bio/Tools/Run/Alignment/Amap.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Blat:
    file: lib/Bio/Tools/Run/Alignment/Blat.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::DBA:
    file: lib/Bio/Tools/Run/Alignment/DBA.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Exonerate:
    file: lib/Bio/Tools/Run/Alignment/Exonerate.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Gmap:
    file: lib/Bio/Tools/Run/Alignment/Gmap.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Kalign:
    file: lib/Bio/Tools/Run/Alignment/Kalign.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Lagan:
    file: lib/Bio/Tools/Run/Alignment/Lagan.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::MAFFT:
    file: lib/Bio/Tools/Run/Alignment/MAFFT.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::MSAProbs:
    file: lib/Bio/Tools/Run/Alignment/MSAProbs.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Muscle:
    file: lib/Bio/Tools/Run/Alignment/Muscle.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Pal2Nal:
    file: lib/Bio/Tools/Run/Alignment/Pal2Nal.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Probalign:
    file: lib/Bio/Tools/Run/Alignment/Probalign.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Probcons:
    file: lib/Bio/Tools/Run/Alignment/Probcons.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Proda:
    file: lib/Bio/Tools/Run/Alignment/Proda.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::Sim4:
    file: lib/Bio/Tools/Run/Alignment/Sim4.pm
    version: '1.007003'
  Bio::Tools::Run::Alignment::StandAloneFasta:
    file: lib/Bio/Tools/Run/Alignment/StandAloneFasta.pm
    version: '1.007003'
  Bio::Tools::Run::Analysis::Job::soap:
    file: lib/Bio/Tools/Run/Analysis/soap.pm
    version: '1.007003'
  Bio::Tools::Run::Analysis::soap:
    file: lib/Bio/Tools/Run/Analysis/soap.pm
    version: '1.007003'
  Bio::Tools::Run::AnalysisFactory::soap:
    file: lib/Bio/Tools/Run/AnalysisFactory/soap.pm
    version: '1.007003'
  Bio::Tools::Run::BEDTools:
    file: lib/Bio/Tools/Run/BEDTools.pm
    version: '1.007003'
  Bio::Tools::Run::BEDTools::Config:
    file: lib/Bio/Tools/Run/BEDTools/Config.pm
    version: '1.007003'
  Bio::Tools::Run::BlastPlus:
    file: lib/Bio/Tools/Run/BlastPlus.pm
    version: '1.007003'
  Bio::Tools::Run::BlastPlus::Config:
    file: lib/Bio/Tools/Run/BlastPlus/Config.pm
    version: '1.007003'
  Bio::Tools::Run::Coil:
    file: lib/Bio/Tools/Run/Coil.pm
    version: '1.007003'
  Bio::Tools::Run::EMBOSSApplication:
    file: lib/Bio/Tools/Run/EMBOSSApplication.pm
    version: '1.007003'
  Bio::Tools::Run::EMBOSSacd:
    file: lib/Bio/Tools/Run/EMBOSSacd.pm
    version: '1.007003'
  Bio::Tools::Run::ERPIN:
    file: lib/Bio/Tools/Run/ERPIN.pm
    version: '1.007003'
  Bio::Tools::Run::Ensembl:
    file: lib/Bio/Tools/Run/Ensembl.pm
    version: '1.007003'
  Bio::Tools::Run::Eponine:
    file: lib/Bio/Tools/Run/Eponine.pm
    version: '1.007003'
  Bio::Tools::Run::FootPrinter:
    file: lib/Bio/Tools/Run/FootPrinter.pm
    version: '1.007003'
  Bio::Tools::Run::Genemark:
    file: lib/Bio/Tools/Run/Genemark.pm
    version: '1.007003'
  Bio::Tools::Run::Genewise:
    file: lib/Bio/Tools/Run/Genewise.pm
    version: '1.007003'
  Bio::Tools::Run::Genscan:
    file: lib/Bio/Tools/Run/Genscan.pm
    version: '1.007003'
  Bio::Tools::Run::Glimmer:
    file: lib/Bio/Tools/Run/Glimmer.pm
    version: '1.007003'
  Bio::Tools::Run::Hmmer:
    file: lib/Bio/Tools/Run/Hmmer.pm
    version: '1.007003'
  Bio::Tools::Run::Infernal:
    file: lib/Bio/Tools/Run/Infernal.pm
    version: '1.007003'
  Bio::Tools::Run::MCS:
    file: lib/Bio/Tools/Run/MCS.pm
    version: '1.007003'
  Bio::Tools::Run::Match:
    file: lib/Bio/Tools/Run/Match.pm
    version: '1.007003'
  Bio::Tools::Run::Mdust:
    file: lib/Bio/Tools/Run/Mdust.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::FastTree:
    file: lib/Bio/Tools/Run/Phylo/FastTree.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Gerp:
    file: lib/Bio/Tools/Run/Phylo/Gerp.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Hyphy::Base:
    file: lib/Bio/Tools/Run/Phylo/Hyphy/Base.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Hyphy::BatchFile:
    file: lib/Bio/Tools/Run/Phylo/Hyphy/BatchFile.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Hyphy::FEL:
    file: lib/Bio/Tools/Run/Phylo/Hyphy/FEL.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Hyphy::Modeltest:
    file: lib/Bio/Tools/Run/Phylo/Hyphy/Modeltest.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Hyphy::REL:
    file: lib/Bio/Tools/Run/Phylo/Hyphy/REL.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Hyphy::SLAC:
    file: lib/Bio/Tools/Run/Phylo/Hyphy/SLAC.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::LVB:
    file: lib/Bio/Tools/Run/Phylo/LVB.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Molphy::ProtML:
    file: lib/Bio/Tools/Run/Phylo/Molphy/ProtML.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Njtree::Best:
    file: lib/Bio/Tools/Run/Phylo/Njtree/Best.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phast::PhastCons:
    file: lib/Bio/Tools/Run/Phylo/Phast/PhastCons.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phast::PhyloFit:
    file: lib/Bio/Tools/Run/Phylo/Phast/PhyloFit.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phylip::Base:
    file: lib/Bio/Tools/Run/Phylo/Phylip/Base.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phylip::Consense:
    file: lib/Bio/Tools/Run/Phylo/Phylip/Consense.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phylip::DrawGram:
    file: lib/Bio/Tools/Run/Phylo/Phylip/DrawGram.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phylip::DrawTree:
    file: lib/Bio/Tools/Run/Phylo/Phylip/DrawTree.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phylip::Neighbor:
    file: lib/Bio/Tools/Run/Phylo/Phylip/Neighbor.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phylip::PhylipConf:
    file: lib/Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phylip::ProtDist:
    file: lib/Bio/Tools/Run/Phylo/Phylip/ProtDist.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phylip::ProtPars:
    file: lib/Bio/Tools/Run/Phylo/Phylip/ProtPars.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phylip::SeqBoot:
    file: lib/Bio/Tools/Run/Phylo/Phylip/SeqBoot.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Phyml:
    file: lib/Bio/Tools/Run/Phylo/Phyml.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::QuickTree:
    file: lib/Bio/Tools/Run/Phylo/QuickTree.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Raxml:
    file: lib/Bio/Tools/Run/Phylo/Raxml.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::SLR:
    file: lib/Bio/Tools/Run/Phylo/SLR.pm
    version: '1.007003'
  Bio::Tools::Run::Phylo::Semphy:
    file: lib/Bio/Tools/Run/Phylo/Semphy.pm
    version: '1.007003'
  Bio::Tools::Run::Primate:
    file: lib/Bio/Tools/Run/Primate.pm
    version: '1.007003'
  Bio::Tools::Run::Primer3:
    file: lib/Bio/Tools/Run/Primer3.pm
    version: '1.007003'
  Bio::Tools::Run::Prints:
    file: lib/Bio/Tools/Run/Prints.pm
    version: '1.007003'
  Bio::Tools::Run::Profile:
    file: lib/Bio/Tools/Run/Profile.pm
    version: '1.007003'
  Bio::Tools::Run::Promoterwise:
    file: lib/Bio/Tools/Run/Promoterwise.pm
    version: '1.007003'
  Bio::Tools::Run::Pseudowise:
    file: lib/Bio/Tools/Run/Pseudowise.pm
    version: '1.007003'
  Bio::Tools::Run::RNAMotif:
    file: lib/Bio/Tools/Run/RNAMotif.pm
    version: '1.007003'
  Bio::Tools::Run::RepeatMasker:
    file: lib/Bio/Tools/Run/RepeatMasker.pm
    version: '1.007003'
  Bio::Tools::Run::Samtools:
    file: lib/Bio/Tools/Run/Samtools.pm
    version: '1.007003'
  Bio::Tools::Run::Samtools::Config:
    file: lib/Bio/Tools/Run/Samtools/Config.pm
    version: '1.007003'
  Bio::Tools::Run::Seg:
    file: lib/Bio/Tools/Run/Seg.pm
    version: '1.007003'
  Bio::Tools::Run::Signalp:
    file: lib/Bio/Tools/Run/Signalp.pm
    version: '1.007003'
  Bio::Tools::Run::Simprot:
    file: lib/Bio/Tools/Run/Simprot.pm
    version: '1.007003'
  Bio::Tools::Run::StandAloneBlast:
    file: lib/Bio/Tools/Run/StandAloneBlast.pm
    version: '1.007003'
  Bio::Tools::Run::StandAloneBlastPlus:
    file: lib/Bio/Tools/Run/StandAloneBlastPlus.pm
    version: '1.007003'
  Bio::Tools::Run::StandAloneNCBIBlast:
    file: lib/Bio/Tools/Run/StandAloneNCBIBlast.pm
    version: '1.007003'
  Bio::Tools::Run::StandAloneWUBlast:
    file: lib/Bio/Tools/Run/StandAloneWUBlast.pm
    version: '1.007003'
  Bio::Tools::Run::Tmhmm:
    file: lib/Bio/Tools/Run/Tmhmm.pm
    version: '1.007003'
  Bio::Tools::Run::TribeMCL:
    file: lib/Bio/Tools/Run/TribeMCL.pm
    version: '1.007003'
  Bio::Tools::Run::Vista:
    file: lib/Bio/Tools/Run/Vista.pm
    version: '1.007003'
  Bio::Tools::Run::tRNAscanSE:
    file: lib/Bio/Tools/Run/tRNAscanSE.pm
    version: '1.007003'
recommends:
  Algorithm::Diff: '0'
  Bio::FeatureIO: '0'
  Config::Any: '0'
  File::Sort: '0'
  IO::String: '0'
  IPC::Run: '0'
  XML::Twig: '0'
requires:
  Bio::Root::Root: '0'
  Bio::Root::Version: '1.007000'
  perl: v5.6.1
resources:
  license: http://dev.perl.org/licenses/
version: '1.007003'
x_serialization_backend: 'CPAN::Meta::YAML version 0.018'