15 Apr 2011 19:35:57 UTC
- Distribution: BioPerl-DB
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- License: perl_5
- Perl: v5.6.1
- Activity24 month
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- Latest versionCJFIELDS Christopher Fieldsand 1 contributors
- BioPerl Team
- AUTHOR - Yves Bastide
Bio::DB::BioSQL::Pg::AnnotationCollectionAdaptorDriver - DESCRIPTION of Object
Give standard usage here
Describe the object here
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firstname.lastname@example.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Please direct usage questions or support issues to the mailing list:
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
Email ybastide at irisa.fr
Describe contact details here
Additional contributors names and emails here
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
Title : insert_object Usage : Function: See parent class. We override this here because AnnotationCollection in the Pg biosql schema doesn''t really correspond to its own entity. I.e., we do (almost) nothing here. Example : Returns : The primary key of the newly inserted record. Args : A Bio::DB::BioSQL::BasePersistenceAdaptor derived object (basically, it needs to implement dbh(), sth($key, $sth), dbcontext(), and get_persistent_slots()). The object to be inserted. A reference to an array of foreign key objects; if any of those foreign key values is NULL (some foreign keys may be nullable), then give the class name.
Title : update_object Usage : Function: See parent class. We override this here to not do anything in particular, as AnnotationCollection is only a virtual entity. Example : Returns : The number of updated rows Args : A Bio::DB::BioSQL::BasePersistenceAdaptor derived object (basically, it needs to implement dbh(), sth($key, $sth), dbcontext(), and get_persistent_slots()). The object to be updated. A reference to an array of foreign key objects; if any of those foreign key values is NULL (some foreign keys may be nullable), then give the class name.
Module Install Instructions
To install Bio::BioEntry, copy and paste the appropriate command in to your terminal.
perl -MCPAN -e shell install Bio::BioEntry
For more information on module installation, please visit the detailed CPAN module installation guide.