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11 Dec 2018 13:25:00 UTC
- Distribution: Bio-ViennaNGS
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Bus factor: 0- License: perl_5
- Perl: v5.10.0
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and 1 contributors- Michael T. Wolfinger
- Dependencies
- Bio::DB::Fasta
- Bio::DB::Sam
- Bio::Perl
- Bio::Root::Version
- Bio::SeqUtils
- Bio::Tools::GFF
- Carp
- Cwd
- Data::Dumper
- Env
- Exporter
- File::Basename
- File::Find
- File::Path
- File::Share
- File::Slurp
- File::Temp
- FindBin
- Getopt::Long
- IPC::Cmd
- List::Util
- Math::Round
- Moose
- Moose::Role
- Moose::Util::TypeConstraints
- MooseX::Clone
- POSIX
- Params::Coerce
- Path::Class
- PerlIO::gzip
- Pod::Usage
- Template
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NAME
Bio::ViennaNGS::FeatureIntervalN - A Moose wrapper for named genomic intervals.
SYNOPSIS
use Bio::ViennaNGS::FeatureIntervalN; my $feat = Bio::ViennaNGS::FeatureIntervalN->new(chromosome => "chr1", start => "1200", end => "4300", name => "myFeature", );
DESCRIPTION
This module provides an object-oriented interface for storing elementary names genomic intervals characterized via chromosome, start position, end position and name.
This class inherits from Bio::ViennaNGS::FeatureInterval.
SEE ALSO
AUTHORS
Michael T. Wolfinger <michael@wolfinger.eu>
COPYRIGHT AND LICENSE
Copyright (C) 2014-2017 Michael T. Wolfinger <michael@wolfinger.eu>
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.10.0 or, at your option, any later version of Perl 5 you may have available.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
Module Install Instructions
To install Bio::ViennaNGS, copy and paste the appropriate command in to your terminal.
cpanm Bio::ViennaNGS
perl -MCPAN -e shell install Bio::ViennaNGS
For more information on module installation, please visit the detailed CPAN module installation guide.