Bio::RNA::RNAaliSplit - Split and deconvolute structural RNA multiple sequence alignments


Version 0.11


This module is a Moose handler for horizontal splitting and evaluation of structural RNA multiple sequence alignments. It employs third party tools (RNAalifold, RNAz, R-scape) for classification of subalignments, each folding into a common consensus structure.


Michael T. Wolfinger, <michael at>


Please report any bugs or feature requests to bug-bio-rna-rnaalisplit at, or through the web interface at I will be notified, and then you'll automatically be notified of progress on your bug as I make changes.


You can find documentation for this module with the perldoc command.

    perldoc Bio::RNA::RNAaliSplit

You can also look for information at:


Copyright 2017-2019 Michael T. Wolfinger <> and <>

This program is free software; you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details.

You should have received a copy of the GNU Affero General Public License along with this program. If not, see