NAME

Bio::MUST::Core::Seq - Nucleotide or protein sequence

VERSION

version 0.211470

SYNOPSIS

    # TODO

DESCRIPTION

    # TODO

CONSTRUCTORS

clone

reverse_complemented_seq

spliced_seq

ACCESSORS

all_states

state_at

delete_site

PROPERTIES

is_protein

is_rna

is_aligned

is_subseq_of

is_superseq_of

first_site

is_missing

is_gap

nomiss_seq_len

purity

MUTATORS

uc

recode

degap

gapify

spacify

trim

pad_to

clear_new_tag

MISC METHODS

raw_str

wrapped_str

codons

AUTHOR

Denis BAURAIN <denis.baurain@uliege.be>

CONTRIBUTORS

  • Catherine COLSON <ccolson@doct.uliege.be>

  • Arnaud DI FRANCO <arnaud.difranco@gmail.com>

  • Valerian LUPO <valerian.lupo@doct.uliege.be>

COPYRIGHT AND LICENSE

This software is copyright (c) 2013 by University of Liege / Unit of Eukaryotic Phylogenomics / Denis BAURAIN.

This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.