Modules

MS
Namespace for mass spectrometry-related libraries
interface to HUPO PSI controlled vocabularies
core functions for molecular mass calculations
utility functions for proteomics calculations
A class representing peptide species for proteomic analysis
A class representing protein species for proteomic analysis
Base class for all file parsers
A simple but complete imzML parser
An ImzML spectrum object
A simple but complete MGF parser
An MGF spectrum object
A simple but complete MS1/MS2 parser
An MSn spectrum object
A simple but complete mzIdentML parser
mzIdentML database sequence object
mzIdentML peptide object
mzIdentML peptide evidence object
mzIdentML protein group object
base class for SequenceCollection children
A simple but complete mzML parser
An MzML chromatogram object
The base class for MzML spectrum and chromatogram records
An MzML spectrum object
A simple but complete mzQuantML parser
A simple but complete mzXML parser
An MzXML spectrum object
A simple but complete pepXML parser
pepXML search result object
A simple but complete protXML parser
A protXML protein group
Base class for XML-based parsers
Base class for XML-based parsers with support for referenceableParamGroups
Base class for XML-based records
Base class for XML-based records with support for referenceableParamGroups
A class to facilitate construction of MS/MS protein search databases
interface for Uniprot downloads
Base class for spectrum objects