Bio::ViennaNGS::Feature - A Moose wrapper for BED6-type genomic intervals.
use Bio::ViennaNGS::Feature; my $feat = Bio::ViennaNGS::Feature->new(chromosome => "chr1", start => "1200", end => "4300", strand => "+", name => "foobar", score => "100", ); $feat->dump();
This module provides an object-oriented interface for storing genomic intervals characterized via chromosome, start position, end position, name, score and strand. As such, it can be regarded a simple wrapper for BED6 elements.
Title : dump
Function: Print a tab-separated representation of
$obj(a BED6 line).
Michael T. Wolfinger <email@example.com>
Copyright (C) 2014-2018 Michael T. Wolfinger <firstname.lastname@example.org>
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.10.0 or, at your option, any later version of Perl 5 you may have available.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.